Category Software Times in Use
accessibility
arabic
archivers
astro
audio
base
benchmarks
biology ariadne 2
artemis 2
avida 8
bamtools 26
beast2 2
bedtools 21
biococoa 3
blat 6
bowtie 2
bowtie2 83
bwa 29
canu 70
cd-hit 83
cdbfasta 6
chemeq 4
clustal-omega 2
clustalw 7
clustalx 2
ddocent 21
diamond 2
edirect 2
emboss 2
fasta3 84
fastahack 23
fastdnaml 4
fastool 2
fastq-join 2
fastqc 83
fasttree 82
fastx_toolkit 1
fluctuate 4
freebayes 17
garlic 2
gff2ps 2
gmap 2
gperiodic 2
grappa 4
hmmer 10
htslib 92
infernal 2
iqtree 4
jellyfish 1
kallisto 78
libgtextutils 2
metal 2
microbiomeutil 2
molden 2
mopac 27
muscle 84
ncbi-blast+ 11
ncbi-toolkit 2
ngs 5
p5-trimgalore 78
pbbam 2
pbseqan 2
pear-merger 23
plink 6
plinkseq 82
py27-biom-format 4
py27-biopython 2
py27-cutadapt 84
py27-macs2 78
py27-pyfasta 17
py27-q2-deblur 2
py27-q2-feature-classifier 2
py27-q2-vsearch 2
py27-qiime2 2
py36-biopython 2
py36-pyfasta 59
pycogent 82
pyfasta 4
rainbow 23
rdp-classifier22 2
samtools 92
seqan 2
seqtk 23
seqtools 82
smithwaterman 23
sortmerna 2
stacks 21
swarm 2
tabixpp 23
trimadap 23
trimmomatic 21
unanimity 3
vcflib 21
vcftools 81
cad
chinese
comms
converters
databases
deskutils
devel
dns
editors
emulators
finance
french
ftp
games
german
graphics
hardenedbsd
hebrew
hungarian
irc
japanese
java
korean
kuon
lang
local
mail
math
misc
multimedia
net
net-im
net-mgmt
net-p2p
netflix
news
palm
polish
ports-mgmt
portuguese
print
russian
science
security
shells
sysutils
tcl
textproc
ukrainian
vietnamese
wip
www
x11
x11-clocks
x11-drivers
x11-fm
x11-fonts
x11-servers
x11-themes
x11-toolkits
x11-wm